Live webinar on Analysis of Variants using GeneSpring GX 14.9 by Dr. Dipa Roy Choudhury on 6 Dec 2017, 8 AM PST
Abstract:
Variant analysis...
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Webinar on Analysis of Variants using GeneSpring GX 14.9 on 6 Dec 2017
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GeneSpring webinar- Uncovering mechanisms of Hepatotoxicity
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New NGS-Based Approach Scores High In Diagnosing Retinoblastoma: Study
NGS- based approach for 100% mutation detection rate in patients with Retinoblastoma. Approach proves to be six times more economical than Reflex Mode... -
Webinar-Streamlining large scale analysis using the Strand NGS Pipeline Manager 24Feb
Live Webinar on Streamlining large scale analysis using the Strand NGS Pipeline Manager on 24 Feb 2016.
Speaker: Dr. Vamsi Veeramachaneni,...Last edited by Strandlife; 02-01-2016, 10:52 AM. -
All SAM alignments on reverse strand
I just went through my first TopHat analysis, and am worried about the output. There are actually two things that concern me:
1. The bitwise... -
Webinar on 31 Mar-Integrated Analysis using Metadata Framework & Correlation Analysis
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Agilent and Strand to present webinar on 'Integrated Multi-Omics Analysis'
Last edited by Strandlife; 11-12-2014, 09:52 PM. -
problem about transcripts assembled by scripture
Hi
Does anyone have experiences in using the scripture tool to assembly transcripts from RNA-seq data?
My RNA-seq data is... -
Paired end RNA-seq orientation
Can someone explain to me what the orientation in paired-end RNA-seq data means? Is forward/forward the standard orientation? How does this affect tophat... -
feature coverage: + and - strands, overlaps
Hello,
I did feature coverage with SeqMonk,
and I have problems to know where my reads map:
I used a mRNA probe generator,
... -
BFAST + GATK -> strand bias?
Hi All,
I have HiSeq exome data, 75 b paired end. I've used bfast to align, which, if I am not mistaking, converts one end to its complement... -
strand of query and mate
Hi everybody,
I'm performing downstream pair-end analysis on Genome Analyzer II data. The reads was aligned against a reference genome... -
Illumina directional RNA-seq protocol
Hi,
I am thinking about using Illumina's strand specific RNA seq protocol, based on the use of their small-RNA library prep kit (see attachment).... -
Region mapped by reads in only one orientation
I cannot recollect what name these regions are referred by?
So, I see these regions along the reference, which have a lot of tiled reads...
