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splaisan started a topic merging and de-duplicating structural variant calls (bedpe)

in Bioinformatics

06-27-2011, 07:29 AM
merging and de-duplicating structural variant calls (bedpe)

(modified from the BioStar initial post)http://seqanswers.com/forums/images/smilies/smile.gif

I am looking for code/tools to merge and...

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bioinfosm started a topic PEMer tool - rearrangements from short reads

in Bioinformatics

04-01-2009, 08:54 AM
PEMer tool - rearrangements from short reads

Anyone having experience using the tool?
I liked the tool, using off maq mapped reads to identify structural rearrangements, yielding a single...

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bioinfosm started a topic Solexa anomaly.txt for structual variants

in Bioinformatics

12-31-2008, 08:27 AM
Solexa anomaly.txt for structual variants

Hi there,

Anyone has experience parsing information out of anomaly.txt generated from eland_pair analysis? It has information about mate...

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