Hey there,
I have been using tadpole for error correction (and BBtools in general) and I am extremely happy with its results and performance....
3 results in 0.0030 seconds.
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Run Tadpole (BBtools) only on sub-sets of reads from input files
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Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files
I'd like to introduce a new member of the BBMap package, Clumpify. This is a bit different from other tools in that it does not actually change your...Last edited by Brian Bushnell; 12-04-2016, 12:23 AM. -
Introducing Tadpole: an assembler, error-corrector, and read-extender
Tadpole, a new BBTool, is an extremely fast kmer-based assembler. How fast is it? Around 250x faster than SPAdes with --careful (which is how we generally...Last edited by Brian Bushnell; 10-14-2015, 05:49 PM.