HTML Code:
tblastn -query t3ss.fasta -subject org1.fasta -outfmt '6 qseqid qstart qend sseqid sstart send pident
5 results in 0.0029 seconds.
-
Is it possible to print DNA sequences of subject organism in tblastn?
I did tblastn analysis by following command
... -
How to specify/calculate subject coverage in tBLASTn
I have been screening the homologous gene sequences from my genome of interest by doing tBLASTn, wherein I have to specify two mandatory parameters such... -
Best tool to view sequence alignment?
I blasted my de novo assembled RNA-Seq transcriptome for a particular protein using tblastn, and found three transcripts similar to this protein. The... -
translated seq of tblastn hits
Hi,
From the results of tblastn, how can I get the translated sequence of each hit? Suppose that I tblastn and check representative genome and... -
Genome Annotation Pipeline Help Required
First post as a user here, so please go easy on me for lack of due diligence
We have a genome assembled from Illumina data. There is...
