We are searching for noncanonical splice sites.
We have produced RNA-seq of a set of 60 human samples and produced aligs against human...
3 results in 0.0022 seconds.
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Missing noncanonical splice sites in TopHat align.
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Tophat 2.0.10 woes: Error running 'long_spanning_reads'
Hi
I know this error has been reported before for previous versions of Tophat2; well, its still happening in 2.0.10. As suggested by the... -
tophat 2.0.10:WARNING: read pairing issues detected (check prep_reads.log) !
I am aligning paired end reads that have been trimmed of adapters with cutadap using tophat 2.0.10.
Paired read log has this:
/PHShome/bak22/src/tophat-2.0.10.Linux_x86_64/prep_reads:...
