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waterV started a topic DE exons to DE transcripts

in Bioinformatics

08-06-2013, 03:41 PM
DE exons to DE transcripts

Hi everyone,
I aligned my reads using tophat and loaded the results in R to do the DE analysis using DESeq. I feed it an exon annotation and get...

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desmo started a topic Table of transcript variant 1

in Bioinformatics

07-10-2013, 08:10 AM
Table of transcript variant 1

Hi all,
I really hope that someone could help me.
I would like to have a table that reports the information about the all the transcripts...

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amarth started a topic Looking for no-hits within Sample & Reference Genome

in Bioinformatics

01-21-2013, 01:15 PM
Looking for no-hits within Sample & Reference Genome

Hi pals,

This is amarth, and my question is:

How can I extract no-hits data from the alignment of the sample, with the...

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