Hello!
can someone please give an opinion: does that make sense to merge PE reads before a de novo RNA-seq assembly (say with Trinity)?
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7 results in 0.0036 seconds.
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Merging PE reads before de novo RNA-Seq assembly
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quality filtering error usearch
Hi, after trimming bad quality ends and the primers with cutadapt I am using usearch to do some quality filltering with this little script:
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Biom Table Problem
Hello all,
So I am having some trouble with creating a biom table. I am using usearch, and my problem is that my newly created biom table... -
usearch ublast for nucleotide databases
Hi Everyone,
I am having some trouble using usearch ublast. I am trying test a database I made using:
usearch -makeudb_ublast myFasta.fasta... -
cannot get usearch ublast to work for nucleotide
Hi Everyone,
I am having some trouble using usearch ublast. I am trying test a database I made using:
usearch -makeudb_ublast myFasta.fasta... -
Cannot get usearch ublast to work on nucleotide databases
Hi Everyone,
I am having some trouble using usearch ublast. I am trying test a database I made using:
usearch -makeudb_ublast... -
usearch --cluster causes "Segmentation fault (core dumped)"
I am running USEARCH 5.1.221 in a ubuntu pangolin 64 bit, and I am trying to run the following command, which is part of the otupipe.bash,
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