Variant Analysis Online Course
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22-25 October
π Register here!
https://genomics.ed.ac.uk/event/variant-analysis/
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Variant Analysis Online Course @ Edinburgh Genomics
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get rsID or positions from variant name/gene info
Hi,
I have a list of variant and gene info as follows:
MCOLN1 c.406-2A>G
G6PC c.247C>T
PCDH15 c.733C>T... -
Webinar: Perform large NGS assembly and analysis on any computer
Join DNASTAR Senior Product Manager Matthew Keyser to learn how to quickly assemble large NGS data sets using a simple laptop or desktop computer, including... -
Help with Sanger Imputation Service - $50
Hi there!
I'm looking for someone to help me in imputing genotype data by either using impute2 or Sanger Imputation. I'm open to any other... -
Variant Analysis, Bioinformatics Prerequisites, & Genome Browser workshops @ UC Davis
Announcing Three Upcoming Workshops at University of California, Davis (Davis, CA, USA)
UCSC Genome Browser β¦ Bioinformatics Prerequisites... -
Training in Variant Analysis @NIH,USA Feb 27 - Mar 2, 2018
Training in Variant Analysis
Feb 27 - Mar 2, 2018
Where?
National Institutes of Health
9000 Rockville Pike... -
Webinar on Analysis of Variants using GeneSpring GX 14.9 on 6 Dec 2017
Live webinar on Analysis of Variants using GeneSpring GX 14.9 by Dr. Dipa Roy Choudhury on 6 Dec 2017, 8 AM PST
Abstract:
Variant analysis... -
Variant Analysis Workshop, Aug. 21-25
Now in its 10th year, the UC Davis Bioinformatics Core Training Program will be teaching a Variant Analysis Workshop August 21-25!
Participants... -
Haplotyping/genotyping tool PacBio?
Hi all,
we have data from 40 different amplicons of different sizes (400 - 4000 bp) that have various coverage levels sequenced in a plant,... -
RNA-Seq and Variant Analysis Workshop (Aug 29 - Sep 2)
You wonβt want to miss our 9th annual Summer Bioinformatics Workshop!
Aug 29 - Sept. 2, 2016
Using Galaxy for Analysis of RNA-Seq,... -
Webinar 6/22: Speed, Accuracy and Capacity for Your NGS Analysis Projects
Join us for a webinar tomorrow, June 22 at 12 pm EDT/9 am PDT.
DNASTAR NGS Senior Applications Manager, Matt Keyser and VP of Sales, Dr.... -
Webinar: Variant Analysis in Lasergene Genomics Suite
Join us for a webinar on Wednesday, March 23 at 12:00 pm EDT (GMT -4:00).
Matthew Keyser of DNASTAR will give a live demonstration of... -
variant calling on a subsample of a BAM file..
Hi,
Can someone explain the following phenomenon. I ran bcftools (bcftools call -v -c )on a pileup created by samtools. This resulted in... -
Webinar: Achieving Highly Accurate NGS Variant Calling
Join us on Wednesday, October 21 at 12:00 PM EDT (UTC -4:00) for a live webinar featuring:
- Discussion of accuracy and validation of NGS alignments
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Error: Invalid format for pileup at line null in varscan2
Hi,
I am using Varscan2 with readcounts like follows
...Code:samtools mpileup -f /home/tsekara/Transcriptomes/trinity5_frameDPcorrected.fa
