Hello,
I used snpeff to annotate a set of variants and I would like to only visualize where a particular type of variant (non-synonymous...
8 results in 0.0024 seconds.
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Visualize just non-synonymous variants in IGV
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DEIVA: a web application for interactive visual analysis of differential gene express
Dear SEQanswers members,
we have developed a web app, DEIVA, for interactive visual analysis of differential gene expression results, such... -
Alignment to multiple reference sequences
Hello,
I'm interested in determining if plasmid sequences are in a NGS data set and I was thinking about creating a master fasta file with... -
Discrepancy in DP value in vcf file and reads visualization in IGV
A sample variant from my vcf file :
I 27000 . A G 37.88 . AC=2;AF=1.00;AN=2;DP=51;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=6.53;MQ0=49;QD=0.74... -
ChIP-chip to Coverage?
Hello to Everyone!
I am looking for a way to visualize data from ChIP-chip into Genome browser, and perhaps doing some aggregation plots... -
Best tool to view sequence alignment?
I blasted my de novo assembled RNA-Seq transcriptome for a particular protein using tblastn, and found three transcripts similar to this protein. The... -
BioLayout Express3D Version 3.1 Released
The BioLayout team is pleased to announce the release of BioLayout Express3D version 3.1, a powerful tool for the visualization and analysis of network... -
Wed 9/25 - Integrated Genome Browser on-line training
Join us for a live, on-line tutorial on Integrated Genome Browser:
"Focus on a Feature: Working with Sequence Data."
Date:...
