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JenBarb started a topic miRNA seed sequence to target zebrafish genome

in Bioinformatics

12-15-2017, 08:51 AM
miRNA seed sequence to target zebrafish genome

Hello,
Does anyone have any advice on how I can take a 7mer seed sequence of about 500 miRNAs and run a blast on all zebrafish genes in order...

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hyacinth2011 started a topic Where to get reference fasta transcriptome for Salmon?

in Bioinformatics

09-20-2016, 08:25 AM
Where to get reference fasta transcriptome for Salmon?

Hello -

My apologies to everyone on the forum. I am a new user of NGS tools. My question is very basic:

For running Salmon...

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MichelaG started a topic Best control in RNAseq for homozygous mutant in transgenic background

in RNA Sequencing

12-11-2014, 02:00 PM
Best control in RNAseq for homozygous mutant in transgenic background

What is the best control in RNAseq analysis for an homozygous mutant in transgenic background? (for zebrafish)

Should it be an heterozygous...

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