Does anyone know how DESeq2 handles genes that have zero counts in one condition and >0 counts in another?
My results output shows that...
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DESeq2 and zero counts in one condition
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zero rna-seq values AFTER normalisation in edgeR
I am using edgeR to analyze RNA-Seq data. This is my script:
library("edgeR")
#############################...
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sum 1 to whole matrix counts in differential expression analysis. its ok?
Hello everybody.
In our laboratory we are analyzing RNAseq data to do a differential expression analysis. Now we are using DESeq and we...Last edited by fgajardoe; 04-23-2014, 12:13 PM.