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  • #1

    Compare protein level identity between 2 databases

    Hi,
    i want to compare identity at the protein level between 2 databases.
    What is the best way?
    i know that blastp can give me the identity for each protein and then i can some all identity and get the "%" identity..
    automate way?

    the result that i want to know is that database A identity to database B in 60% (for example)
    Thanks
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