Hi everyone,
I am fairly new to bioinformatics. I was wondering why I would use -g instead of -G in cufflinks. -G is to quantitate against the reference transcript annotation while -g is to use the reference transcript annotation to guide assembly.
Thank you
I am fairly new to bioinformatics. I was wondering why I would use -g instead of -G in cufflinks. -G is to quantitate against the reference transcript annotation while -g is to use the reference transcript annotation to guide assembly.
Thank you
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