Hi,
I am very new and very much a beginner when it come to NGS technologies. I have aligned my RNAseq reads to the dm3 genome in galaxy (UCSC dm3 Drosophila annotation). For some reason the gene_ids are all annotated as CUFF.6 or CUFF.1 etc. but I would hope and expect gene-ids to be CG numbers from the annotation...
Would anyone know what I have done wrong?
Thanks in advance for any insight
I am very new and very much a beginner when it come to NGS technologies. I have aligned my RNAseq reads to the dm3 genome in galaxy (UCSC dm3 Drosophila annotation). For some reason the gene_ids are all annotated as CUFF.6 or CUFF.1 etc. but I would hope and expect gene-ids to be CG numbers from the annotation...
Would anyone know what I have done wrong?
Thanks in advance for any insight