Hello,
can anyone tell me how to check whether a bam file is from a strand-specific sequecening or not?
for indivial read we can get
!re.getReadNegativeStrandFlag() && !re.getMateNegativeStrandFlag()
re is a SAMRecord
can anyone tell me how to check whether a bam file is from a strand-specific sequecening or not?
for indivial read we can get
!re.getReadNegativeStrandFlag() && !re.getMateNegativeStrandFlag()
re is a SAMRecord