Hi, I just tried GapCloser from SOAP and it seems breaking some scaffolds down which causes a decrease of N50 length... what happens? ![Confused](https://www.seqanswers.com/core/images/smilies/confused.png)
It indeed closes a large part of gaps (Ns from 31.5% to 4.4%), but the resulting scaffolds have a smaller total size and N50....
Christina
![Confused](https://www.seqanswers.com/core/images/smilies/confused.png)
It indeed closes a large part of gaps (Ns from 31.5% to 4.4%), but the resulting scaffolds have a smaller total size and N50....
Christina
Comment