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Hi Everyone,
I produced a MDS plot to show the sample relations of my time-series RNAseq data by using the plotMDS function of edgeR. I found all sample points were plotted along diagonal (dim 1 = dim 2). This is quite different from I saw in other places. How to explain this? Thanks in advance.
I produced a MDS plot to show the sample relations of my time-series RNAseq data by using the plotMDS function of edgeR. I found all sample points were plotted along diagonal (dim 1 = dim 2). This is quite different from I saw in other places. How to explain this? Thanks in advance.