I'm still new in sequence analysis.
I downloaded a virus genome sequence from NCBI and would like to create an annotation object with R package GenomicFeatures. However, the genome sequence is from NCBI, not UCSC.
How to create annotation object if the genome sequence is not from UCSC?
The genome is annotated. How could I find the annotation file? I only found the genome sequence file in fasta.
I'm not familiar with sequence analysis tools. Any advice would be sincerely appreciated.
Thank you very much in advance.
Dicty
I downloaded a virus genome sequence from NCBI and would like to create an annotation object with R package GenomicFeatures. However, the genome sequence is from NCBI, not UCSC.
How to create annotation object if the genome sequence is not from UCSC?
The genome is annotated. How could I find the annotation file? I only found the genome sequence file in fasta.
I'm not familiar with sequence analysis tools. Any advice would be sincerely appreciated.
Thank you very much in advance.
Dicty