Hi everyone,
I'm trying to do an aling of short reads (putative micrornas) to putative precursors using bwa...
but I wanna only perfect matchs between mature and precursor....
in bwa manual I haven't found any parameter to map a read with no mismach.. only gap opening an extesion penalties...
Are there another way to do this???
tnks
I'm trying to do an aling of short reads (putative micrornas) to putative precursors using bwa...
but I wanna only perfect matchs between mature and precursor....
in bwa manual I haven't found any parameter to map a read with no mismach.. only gap opening an extesion penalties...
Are there another way to do this???
tnks
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