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  • Bioinformatics Engineer @ Memorial Sloan-Kettering Cancer Center (NYC)

    Title: Bioinformatics Engineer
    Organization: Memorial Sloan-Kettering Cancer Center
    Department: Computational Biology
    Location: New York, NY, USA
    Start Date: ASAP
    Duration: Full Time

    Description:
    The Bioinformatics Core (BIC) at Memorial Sloan-Kettering Cancer Center (MSKCC) in New York City (Manhattan) is seeking a Bioinformatics Engineer to perform next generation sequence data processing and analysis in a dynamic and exciting academic environment at the nexus of cancer biology, computer science, statistics and clinical research. Work will be performed in a small group atmosphere (approx. 15 members from diverse disciplines) with several active collaborators, and in concert with other Bioinformatics and Software Engineers.

    Responsibilities:
    Design, develop and operate computational pipelines for the analysis of next generation sequencing data. Work will include both large-scale projects and small custom jobs, and span a wide variety of analysis problems.

    BIC facilitates scientific discoveries by supporting basic and clinical research groups. BIC is responsible for building training programs, research project support, web-based tools, a high performance computing facility and database integration of genomic, pathway and clinical information. More information about the Bioinformatics Core is available at http://cbio.mskcc.org/bic.

    MSKCC is an affirmative action, equal opportunity employer.

    Qualifications:
    - Master’s degree, or equivalent, in computer science, bioinformatics, mathematics or a related field, and 2 years of Bioinformatics software development required
    - Strong computational/programming skills; including thorough experience with the following:
    o Unix/Linux environment
    o Clustered computing: (SGE, PBS, or LSF familiarity strongly desired)
    o Next-generation analysis toolkits (PICARD, GATK, samtools, etc.)
    - Advanced skills in Perl (or Python)
    - Knowledge of Java and R is preferred.


    To apply, send CV or resumé to [email protected] and include #bxeng in the subject line.

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