Hi, everyone.
I am in trouble converting gff format file to genbank format.
The gff format file looks like:
Scaffold_15;HRSCAF=18|...
10 results in 0.0032 seconds.
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Gene annotation with Augustus
Hello all,
I am doing structural gene annotation and using augustus as a tool. While it works quite nicely on most of the cases it shows... -
Gene Prediction: AUGUSTUS
Hello All,
I have sequenced and assembled the chloroplast genome of a red alga. I would like to use AUGUSTUS for gene prediction within... -
Question about --genemodel=complete option of Augustus
Hi all,
I am afraid I have a silly question but I am really confused.
I am now trying to construct a de novo gene model... -
Augustus output - how is the incompatible hint groups determined?
Hi, I have a question about the augustus (v3.0.2, v3.0.1) output - specifically when it reports the number of "hint groups fully obeyed" and... -
Augustus: internal stop codons in transcripts
Gene prediction of a draft assembly was done with Augustus, and some of my peptide sequences contain either single or strings of "X"s. From... -
Augustus training questions
Hi, I have a few questions about training Augustus:
1) is etraining something new that supercedes autoAug?
2) Are the training genes... -
Fungal genome annotation
Hi,
I have sequenced the genome of a fungus with very little information, no EST or protein are aviable.
For the gene prediction... -
Augustus training help
Hello all,
Anyone out there have some experience with training Augustus for gene prediction for their specific species? I have been trying... -
Augustus with RNA-Seq
Hey guys, I'm new with bioinformatics and I'm currently working with gene prediction. I would like to know if has someone here that ever use Augustus...
