Hi all,
I am running into troubles with the microarray data I am trying to analyze. Lets try to explain this clearly. I have two sets of...
8 results in 0.0021 seconds.
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Microarray data (bedGraph) to metaplot.
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get coverage of a particular transcript from bedgraph
i have a bedgraph..
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1 10540 10564 4
1 10564 10569 5
1 10569 10590 ... -
Using bedgraph to transcript assemble
Hello, I got some RNA-seq data in bedgraph format and I want to use it for transcript assembly but Cufflinks cannot accept bedgraph as input. So is there... -
Problems with galaxy bedgraph to bigwig
I am trying to convert a bedgraph file ta bigwig file using galaxy (not able to do in linux since the bedGraphToBigWig script runs only in 64 bits and... -
Calculate mappability for an interval?
Hi all,
I downloaded the mappability file from here:
ftp://encodeftp.cse.ucsc.edu/pipelin...odeMapability/
then...Last edited by Vasilisa; 01-16-2013, 09:06 AM. -
Calculate mappability for an interval?
Hi all,
I downloaded the mappability file from here:
ftp://encodeftp.cse.ucsc.edu/pipelin...odeMapability/
...Last edited by Vasilisa; 01-16-2013, 07:10 AM. -
Creating a BedGraph file for STRAND-SPECIFIC short read data
Hi,
does anyone know a tool or program that can create a density profiles across the genome (I assume bedGraph would be the best format)... -
wiggle or bedGraph
Hi all,
I have about 300,000 lines of data I want to add to UCSC genome browser as a custom track.
Few lines of the data...
