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[email protected] started a topic Solid-color space indexing for human fasta file

in SOLiD

12-18-2015, 03:38 AM
Solid-color space indexing for human fasta file

Hello,
I am using BFAST for indexing color space data using the command:

bfast index -f folder/human_bfast.fa -m '11111' -w 5 -A...

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Lv Ray started a topic Bfast

in Bioinformatics

09-11-2014, 06:22 PM
Bfast

Can you help me?
I have read the paper about BFAST, but I am sure I can't index well. My data is about large genome (~2.7Gbp), and the source...

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fpruzius started a topic Bfast Fatal Error during indexing

in Bioinformatics

05-12-2011, 05:35 AM
Bfast Fatal Error during indexing

Hi,

I am trying to index a fastafile with the human genome (build GRCh37, only chromosomes + MT) using bfast. In color space.
I...

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