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Creating Multiple Indexes in Bowtie
Hi! I am trying to build indexes for all the 1200 .fna files I have using Bowtie, but it gives the "Argument list is too long" error. Following...
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Super Large Reference Genome
I am working on a project in which i am analyzing RNAseq data from fused interspecific cell types, specifically mouse cells and rat cells, and then performing....
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bowtie build does not create .rev index files
when attempting to build an index using bowtie-build on a fasta genome file that is 2.1 MB, it does not create the .rev files, it produces 1.ebwt 2.ewbt...
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Building indexes with bowtie-build
Hello, I am currently trying to align two closely related genomes from multiple sequence fasta files. I have a target genome which is made of 1168 sequences...