Hi all,
Does anybody have scripts to convert:
breakdancer output ----> bedpe
delly vcf ---> bedpe...
10 results in 0.0047 seconds.
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SV vcf outputs to bedpe
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Breakdancer installation problem or error
Dear SEQanswer users
Hope you are able to help me with the installation of breakdancer.
I've downloaded version 1.4.5. and... -
Breakdancer inaccurate output.
Hi Guys,
I have run Breakdancer on a mouse KO sample and got several lines containing intrachromosomal translocations but described as interchromosomal,... -
using Breakdancer for mate pair
Dear all ,
I have a little problem about BreakDancer.
I have a mate-pair data from Illumina , and I use some tools to reverse... -
Breakdancer output file question
Hi all,
I am using breakdancer to identify SVs on some whole genome samples. This is the first time that I am using the program and am... -
Breakdancer BAM2cfg output blank
Hello,
I am attempting to generate a configuration file for breakdancer using the BAM2cfg perl script, however when I run the script on... -
Breakdancer SV Questions
These might be very simple questions, but I am new to looking at breakdancer output files, and I am having a little trouble interpreting orientation of... -
Breakdancer multiple files with the same library
Hi,
I was wondering if breakdancer_max supports multiple BAM files with the same library?
Thanks. -
Misunderstanding breakdancer output
Hello
I am running breakdancer for my samples and I get some results that I don't understand.
For example I get these:
1.... -
breakdancer compilation help
I am a beginner for BreakDancer. When I downloaded the breakdancer (v1.3.5.1.zip) source file from https://github.com/genome/breakdancer/tags, I don't...
