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wlangdon started a topic paired end nextgen DNA sequences and BLAST

in Bioinformatics

01-14-2013, 11:42 AM
paired end nextgen DNA sequences and BLAST

Is it possible to use ncbi BLAST on paired end sequences?
I am using BWA or Bowtie2GP at present but it would be nice to
compare against...

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guru started a topic how to filter BWA paired-end alignments?

in Bioinformatics

08-24-2011, 11:36 AM
how to filter BWA paired-end alignments?

Hi,

I want to filter my BAM alignments (generated using BWA on paired-end Illumina reads) to retain only those read pairs where at least...

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mikeworth started a topic using bwa to map illumina paired end reads

in Bioinformatics

07-27-2011, 06:19 AM
using bwa to map illumina paired end reads

hello,

ugh... this is such a stupid question, i'm embarrassed to ask it, but i must. i can't find a definition of the workflow to use bwa...

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