7 results in 0.0030 seconds.
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converting between genome and transcripts coordinates
I need to calculate the exon distance from regions in UTR to the CDS start and I have mm10 genomics coordinates (bed file). I prefer to use refSeq transcripts.... -
Something wrong in FlyBase's gtf (gff to gtf conversion)
Hi All,
I wanted to re-create FlyBase's gtf (FB2015_04) from the gff file. It is a different matter why I want to do that.
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GTF difference in CDS and exon start position
Hi all,
I have a question about the annotation of features in some GTF files. So basically, I've seen that quite often the CDS and exon... -
Annotate coordinates
Hi all
I am wondering if you know a way to determine if a set of chromosome coordinates (chr1:101598917;chr1:101598918;ect), lays in CDS, UTR,... -
How to get exon (cds) annotation of a genome?
Hi,
I need annotation of exons-only (coding sequence region information) of the chicken genome (GallusGallus).
How can I get it... -
CDS vs cDNA
Hi everyone,
I need a help please. I need to verify my understanding of the difference between cDNA and CDS.
From the definition,... -
Implications from comparing cDNA to cds mapping
Hey there,
I've had an RNA Seq experiment on the 454 platform and during data analysis I came to wonder:
I mapped my reads...
