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  • giuliano stirparo
    Junior Member
    • Nov 2011
    • 6
    #1

    Annotate coordinates

    Hi all
    I am wondering if you know a way to determine if a set of chromosome coordinates (chr1:101598917;chr1:101598918;ect), lays in CDS, UTR, Flanking region etc.
    In particular the sets of coordinates are SNPs and I wish to keep those that lay in CDS region.
    Thank you
    Giuliano
    Tags: cds, coordinates, snp, utr
    • miroslav
      Junior Member
      • Feb 2011
      • 6
      #2
      Hi Guliano,
      If you have SNP rs designations you can try NCBI batch query - chromosome report
      miroslav

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