Hi,
I corrected PacBio reads Using LoRDEC tool , now I have a corrected fasta file.
My question,
Can I use Celera Assembler with...
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What reads were assembled by MaSuRCA?
I have assembled several contigs with MaSuRCA 2.3.2. I have two questions:
1) I have one contig that I'm *very* curious how it was built....
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Masurca error - assembler deleted prior to being run
Greetings,
I have installed Masurca-2.2.1 following the installation process documented on the UMD Masurca website.
During...
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Diary: Assembly in SMRT Portal 2.1.1 with HGAP+CA 8.1
Description of genome and assembly desires
SMRT Portal 2.1.1 was released within the last couple of months (packaged with Celera Assembler 7); the...Last edited by pag; 12-20-2013, 07:29 PM.
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Celera Assembler seems to discard HiSeq reads
Ran Celera Assembler on HiSeq and 454 reads separately and got same results. Are there any specific tweaks one should use for HiSeq reads and 454?
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nearly identical sequence in Celera contigs
Hi all,
I have used Celera assembler to create a contig set for the liver fluke genome.
Then I did a self-align on the contigs and found...
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Problem with hybrid assebly with Celera Assembly
Hello, everyone,
Celera Assembler(CA) 6.1 can do hybrid assembly now.
I have 3 types of reads, Solexa (100bp read length, 500bp...
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Celera Assembler runCA failed
Hello
I would like to use the Celera assembler on a small data set for testing the installation.
First, I made the frg file...
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Problem with Celera Assembler
Hello,
I have short reads sequences already in a FRG file (converted from fasta to amos then to frg) which I would like to assemble using...