I have got some peaks from a ChIP-seq data.
Now I'm trying to locate these peaks on the function elements.
But I come up with a question...
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The distribution of peak in ChIP-seq on function element
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Peak annotation resorces
I have used bowtie and MACS to align and find chipseq peaks. Now I want to annotate the peak list to the genes.
I have .go and interpro annotation...Last edited by chipmonk; 04-12-2012, 09:56 PM.