I am performing PAR-CLIP which is typically done using single end however we ran paired because it fit in with our in house set up.
I've...
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Paired end SAM to single end
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CLIP-seq data process, start from sra file
Hi all:
I am trying to re-analyzed a CLIP-SEQ dataset, downloaded from GEO: SRR048973(GSM545212)
http://www.ncbi.nlm.ni...
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Clip truseq adapter sequence from fastq
Here's my public history https://main.g2.bx.psu.edu/u/davidkim/h/ngsworkshop
I am trying to learn NGS using the public data www.ncbi.n...
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Analysis of CLIPseq data
Hi all,
I am wondering if anyone has any sugggestion on how to go about analysing CLIPseq data. I am more of a biologist and I have a very...
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G'day! New on NGS
Hi all,
I'm Paul from Sydney. I am currently working on getting iCLIP protocol to work on my protein of interest. So far I am on the right...