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Extracting specific gene regions from BAM file using GTF
I have pooled population data in BAM format for two populations that should have local adaptations. I have identified gene regions with signatures of... -
Get consensus sequence from blasr alignment
Hello,
I have some pacbio reads which I have aligned to a reference sequence using blasr. I can see the resulting alignment in igv with... -
Extract consensus from BAM + fill gaps from reference
Hi everyone!
I am new to this forum and have the following question:
How can I extract the consensus sequence from a BAM...
