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How to combine data from Human Methylation 27 and 450 platforms?
I am studying the Kidney Renal Clear Cell Carcinoma (TCGA-KIRC) data set of TCGA. The DNA methylation datatype has 200 samples from Human Methylation... -
Bismark Methyl-seq Analysis
We have sequenced a genome using Illumina's True-seq bisulfite sequencing kit. After getting back the seq, we are analyzing methylation rate using Bismark.... -
Determine different methylation patterns after Bismark
Hi Guys,
I have a bismark sam-file including 66 different targets. The next step will be to detect different subpopulations for all targets... -
How to classify promoters according to CpG density
Hello everybody,
A research collaborator has asked us to classify promoters according to their CpG density. Data comes from a RRBS (Reduced...Last edited by Jluis; 01-04-2013, 05:34 AM. -
CpG island detection
Dear All,
We are a small research group who are working on NGS data analysis and Epigenomics. In Epigenomics, our research focus is...
