Dear All,
The repeat families predicted by RepeatModeler contain known TEs and unknown ones. How do we know whether some of which may be...
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RepeatModeler results contain functional domains?
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Heterozygous rate from "de novo" sequencing
Hi,
I've just tried to calculate the heterozygous rate of my seq data, but no luck using gce or even preqc from sga using kmer information.... -
De novo assembly - plant genome - read length + amount
Hi,
I am looking to do my first de novo assembly:
Plant, diploid, genome size of just under 1gig, no reference, 2 samples, happy to start... -
Annotating and finding genes of a non-model organism (no reference genome)
I desperately need some help in brainstorming how to approach my data. I have a de novo assembled genome of a non-model organism (no available reference... -
De novo genome throughput !?!?!?
Dear All:
I want to sequence a de novo genome from a fish(about 1Gb) , using HiSeq200 system. How many coverage should I do, and I can...
