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Merging transcriptomes coming from SRA: caveats and best practices?
I'm about to start a project where I want to pool all existing transcriptomes in SRA for a nonmodel species without reference genome to study differentially... -
Using CEGMA
Hello Guys,
I have a project task, and i need to implement CEGMA for validating the predicted genes in the de-novo assembly. i have... -
Trinity-Duplicate removal
Dear All,
I am using trinity for transcriptomics assembly. I have few queries:-
1) have two condition(Control and Treated)... -
Assembly with a single library always fail?
I'm trying to assemble a ~70M genome from a single Illumina PE library (100nt read, 160M each end, insert size=300bp).
I've tried velvet, Abyss,...Last edited by metheuse; 11-27-2013, 08:26 AM.
