Hi all!
I just need an advice: I have to investigate on small deletions that cause a various diseases, and in particular in prenatal testing....
10 results in 0.0020 seconds.
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Detect small deletion
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VCF Record Help
Can you combine vcf files and incorporate snps and indels that overlap on the same line/record?
Matt -
Death by Genomic Sudoku
I am a grad student with Promethean aspirations, and the challenges that come with such an undertaking.
I have 154 chromatograms of heterozygous... -
Expected insertion: deletion ratio for exome data?
Hi Everyone,
I am wondering what the expected insertion: deletion ratio is for your exomes? Right now I'm getting ~0.9 meaning deletions... -
Which one...?
Hi!
I'm working on a RNA genome (11kb) sequenced by HiSeq2000 (2x100pb). I have a genome reference.
Which is the best software... -
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SAM/CIGAR for deletion before first match
Hi all,
This is my first post here. Just searching this site has answered so many questions I've had previously, but I can't find an answer to... -
Ion Torrent data quality impressions?
Hi.
We have an Ion Torrent PGM where we have sequenced a number of genomes. Looking at the TMAP alignments we definitely see sequencing errors... -
identification of indels/duplications up to 20 bp
Hi,
Is it possible to identify insertions, deletion or duplications of up to 20 bp with target enrichment and Illumina sequencing?
What... -
deletion '*' has quality score in pileup?
I know that asterisks '*' in read bases column represent deletions as place holders in pileup format. But in my data, deletion '*' seems to has base quality...
