Dear SEQ members
I'd like to ask you about the test for distribution.
I hope you give me information of test for similarity of two...
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The effect of normalization on asymetrically DE genes
Hi All,
We are studying a transcriptional repressor protein by comparing the WT to a strain lacking that repressor in an RNAseq experiment. Because...
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distribution of isoforms per gene
Hello,
I was wondering whether the vector of isoform counts, corresponding to a specific gene, can be assumed to follow a multinomial distribution,...
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Transcriptome similarity metric?
Can anyone think of a clever way to compare transcriptomes? Let's say for example I've got a transcriptome (in the form of RPKM values for a number of...
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Unexpected kmer distribution
Hello,
I'm analyzing some Illumina data 35 bp reads that I got from SRA to get some practice analysing NGS data. When I do some QC using...
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[Galaxy] Strange QC Nucleotides Distribution Chart
Hi all,
I am new to the forum but excited about the wealth of knowledge available. I am working on a NGS project in Galaxy using data from...
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Gene expression levels – underlying distribution
Hi there,
I am trying to model the expression level of genes using RNA-Seq. I was wondering if there is any statistical analysis that identified...