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TopHat - empty junction database
Hi all,
I ran TopHat, it aligned reads but couldn't find any junctions! So I received files with left-hand reads and right-hand reads...
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Tophat - Error using Paired End
I tried using Tophat for paired end analysis.
[Tue Feb 9 23:26:32 2010] Mapping reads against m_musculus with Bowtie
[Tue Feb ...