Hi,
Does anybody have experience performing eQTL analysis and/or somatic mutation analysis of bulk RNA-seq data (without normal sample)?...
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Tools for eQTL and somatic mutation analysis of RNA-seq data
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Is there a GTEX trans-eQTL analysis?
Has anyone done a trans-eQTL analysis using data from GTEX? Would it be feasible due to relatively lower sample numbers in GTEX compared to what is required... -
Limiting variants from WGS to GWAS regions to get more significant cis/trans eQTLs?
Hi,
I have ~60 WGS and RNA-Seq samples which should be sufficient to analyze cis-eQTLs, however not sufficient for the trans-eQTLs. I am... -
calculating eQTL zscores
Hi all,
I'm using a linear regression model to specify eQTLs. Can someone please tell me how to calculate a Z-score for the eQTL coefficient? Is... -
Plots using GWAS and eQTL datasets
I want to plot pvalues from eQTL datasets and GWAS summary stats to see the correlations between expression data and GWAS, something which looks like...Last edited by CUAZ; 11-24-2014, 05:22 AM.
