Hi. I have a time series RNASEQ experiment with 2 controls and 3 treated samples for each time point.
sample time condition...
29 results in 0.0038 seconds.
-
DESEQ2 Desing formula time series experiments with sham controls.
-
WGS and RNA-seq integrated in analysis of expression
I need to find some publications about an analysis of the diversity of gene expression based on WGS and RNA-Seq.
I would like to sequent... -
How to model gene network just based on RNAseq data
Hi,
if I just have a lot of RNA seq date of one species, include wt and almost all gene deletion(one by one), how can I model gene regulation... -
Trying to find where an Isoform of a gene is expressed in normal tissue
Hello. I have the sequence of a particular isoform of a gene I'm interested in and I am trying to find out where it is normally expressed in the human... -
Why isn't corset giving me output?
Hi,
I am a Ph.D student and this is my first time doing a differential expression study. I am having an issue with corset and was wondering... -
estimation of the expression changes
Hello everybody,
My colleges send me its pyrosequencing results to be analysed. the data that i got is a list of averages for different... -
Expression profiles probe id meaning?
Hello,
What is difference between different probe in the gene expression profiles?
e.g. Gene: IGF1
Probe ID: 211577_s_at,... -
Isoform ratio investigation in RNA-Seq
Given:
2 samples with bio replicates, along with 1 control
FPKM values for each gene
FPKM values for each isoform of each gene... -
Gene-set expression enrichment
Hi all,
I'm looking for a database in which I can input a gene-list/set and see which tissue-specific expressions are enriched for all... -
How to measure miRNA expression from Illumina libraries
I have a 51 single-end reads generated with MiSeq using NEBNext Multiplex Oligos for Illumina.
The data is obtained from from blood serum... -
Normalizing RNA-seq within samples
Hi all,
I have RNA-seq from different tissues (one RNA-seq for each tissue) and I would like to know for specific genes if and how they... -
Methylation and Expression correlation
I have 3 samples and I am doing a analysis on 2 samples to identify correlated/anticorrelated genes.
I have identified some differentially methylated...Last edited by balaji; 09-16-2013, 12:26 AM. -
appropriate gtf/gff file for repeat element expression
Dear Folks,
I am trying to estimate the expression of known repetitive elements.
I'd like to know what'd be an appropriate... -
Temporal differential expression analysis of RNA-seq
In our present study, we experimentally induced and collected 45 samples showing a wide range of clinical signs of digestive disorders, including the... -
Paired-end miRNA pairs to be used as replicates?
Dear community,
I wanted to ask your advice on the following question:
I have 2 conditions(datasets) of illumina paired-end...
