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[bedtools][fastaFrombed] could not stat file
I have a fasta file rn4.fa with the rat genome and also a fai file rn4.fa.fai which I generated with samtools faidx. I want to extract fasta from bed...
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Cuffmerge: No fasta index found for genome.fa...
Hello all,
Before running through the TopHat Cufflinks workflow with my own data, I am trying it with Drosophila_melanogaster RNA Seq data...
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Samtools faidx errors
Hi,
I am new to samtools and bioinformatics in general. I have a quick question about generating a fasta index file from a .fa file. I...