Can I use the accepted_hits.bam of "tophat2 --fusion-search" to calculate the gene expression level?
Usually I just use tophat...
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tophat-fusion result
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TopHat2 fusion-search : SeqAn error
Hi everyone,
I am using Tophat v2.1.1 with the option --fusion-search.
I downloaded the example and tried exactly the code in...Last edited by bibi; 04-20-2016, 11:28 PM. -
accepted_hits.bam attributes
where can I find an explanation about all the attributes in the accepted_hits.bam file I got after running tophat --fusion-search?
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