5 results in 0.0021 seconds.
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Gap open and extend penalties in Needleman-Wunsch algorithm
Hi guys, I made my own implementation of the Needleman-Wunsch algorithm in Python. This worked pretty well, but then I decided I wanted different penalties... -
What is the effect of modulating the gaplenDiff parameter -G in SOAPdenovo2?
Hello Seqanswers! Long time reader, first time questioner.
I'm trying to figure out what the effect of changing the gaplenDiff parameter... -
SPAdes gap representation vs unknown base
Dear all,
I have assembled a few microbial genomes with SPAdes and would like to upload these WGS projects to NCBI. I have searched to... -
How to open one gap on reads with bowtie2 ?
Hi everyone.
Here, i'm trying to open one gap on a few reads.
To test that things, i use 1.10⁶ reads from illumina sequencing.... -
Protein Secondary Structure Guided Alignments
So I need to make an alignment using secondary structure for gap penalties. I have found that Clustal is suppose to be able to do this but I try to follow...
