Cross-posting this here since it will be of interest. Likely to remain open for 1 week.
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Survey: help define Gencode and NCBI primary transcripts
Last edited by GenoMax; 04-10-2018, 05:38 AM. -
STAR Alignment parameters for varying complexity in library
I'm working with TruSeq data for the mouse genome, with one of the groups having a low complexity library, and the other two having a high complexity... -
[Announcement] Testers needed for new peak annotation tool
Hi,
I am developing a new c++ based open-source tool (peak-tool) to annotate peaks from a bed file using gencode annotation database. ...Last edited by amitra; 05-07-2015, 01:46 PM. -
Can we extract full-length trascripts from gencode gtf
Hello, all
We can see that GENCODE released statistics and GTF annotation as follows:
(1) Statistics: (extracted gencode...Last edited by emanlee; 06-04-2014, 03:29 AM. -
cufflinks/gencode pipeline issues
Hi everyone,
I am trying to use Gencode (ver 7) to do my RNA-seq analysis, but I am having various issues.
1) if I use Gencode...
