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Find gene duplications in a draft genome assembly
Hi everyone, I have recently assembly a draft genome. I consider it has an acceptable quality based on the assessment I made and my biological goals.... -
Coverage Estimates from Masked/Unmasked Genome
Hi All,
I've carried out a mapping run with Illumina paired-end reads to a genome using BWA. From this I've calculated i) x times coverage...Last edited by Magpie101; 11-04-2016, 11:09 AM. -
everestial started a topic Alignment of resequenced population genome data to reference genome (A. lyrata)in GeneralAlignment of resequenced population genome data to reference genome (A. lyrata)
I am working with population specific re-sequenced genome data from A. lyrata. I need to align it to the reference genome which is already available and... -
Mapping applications on Hadoop cluster
Hello,
I would like to know if there are any new mapping applications for paired end data designed to work on hadoop cluster. The ones... -
Can Crossbow work with local fasta data?
Hello,
I have managed to set up a single node hadoop cluster. i installed Crossbow, Bowtie and SOAPsnp with the help of Crossbow manual.... -
mRNA seq analysis
Hi!
I just started with metatranscriptome analysis, so I'm sorry to do a stupid or obvious question... I have metatranscriptome data from food...Last edited by Francy87; 08-14-2013, 06:04 AM.
