Hi, I am trying to merge paired-end illumina reads (read length: 101) .
I am using the command:
fq2fa --merge --filter sample_1.fq...
3 results in 0.0021 seconds.
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IDBA 'std::logic_error'
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Which metagenome assemblers are capable of efficient running on clusters?
Hi, I am trying to choose a metagenome assembler that would be able to run efficiently on a cluster (utilising cores from different nodes and using shared... -
idba_ud Mink and Maxk
I am wondering how to set the mink and maxk in idba-ud. I have already set the read length to be 328 by editing kMaxShortSequence in src/sequence/short_sequence.h...
