idba_ud Mink and Maxk

[eyeziko]

I am wondering how to set the mink and maxk in idba-ud. I have already set the read length to be 328 by editing kMaxShortSequence in src/sequence/short_sequence.h but the mink and maxk remains <124. How do i change the maxk to be greater than >124 cos I have long 2x300 reads and want a higher maxk value. just setting it on command line gives error i.e --kmax 250 gives error

Thank you
Isaac

[eyeziko]

Hey All, I didnt look properly enough before posting. I did find the answer to my question. Yu Peng gave this " You can modify constant kNumUint64 in src/basic/kmer.h to a bigger value (e.g. 6 or 8). This constant controls the number of 64 bit integer for holding k-mer."
That answers my question.
Thank you
Isaac