I'm using the Integrative Genomics Viewer (IGV) to view the alignments achieved from TopHat.
I have four samples (and thus four BAM files)....
3 results in 0.0028 seconds.
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IGV colors entire BAM file as inversions
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Breakpointer, Predicting Structural Variation from SE Illumina Reads + Reference
Hello all,
I am having some difficulty predicting were the breakpoints of a known large-scale inversion (~4-10 Mb, inferred by population... -
Interpreting Pindel output
Hello,
Im using Pindel to detect SV's. For the most part I understand the output I am given, but there are a few types I do not. First,...
