hi all,
tipically the aim of linkage analysis in human disease is to detect candiate genes based upon cosegregation of SNP markers and...
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linkage analysis in targeted NGS data
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Linkage analysis for WGS data
Hi all,
We have performed whole genome sequencing(WGS) in 6 affected individuals and 2 parent samples to identify the causal variant for... -
How to view plink *.ld output
Hello,
I am a newbie in this avenue and I have just managed to generate some population sequencing data. I have generated the vcf files using Unified... -
How to Call Genotypes on NGS datasets for linkage
Hi there,
there are several decent variant callers for NGS data sets, such as samtools, GATK, ... that report variants to a reference in vcf4.0...
