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edeka started a topic mark duplicates option

in Bioinformatics

10-04-2016, 12:39 AM
mark duplicates option

Hello. I would like to use MarkDuplicates of Picard, but I don't know how I should use the options. Could anyone give me an example of this .txt file?...

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mikyi started a topic MarkDuplicate, coverage

in General

08-24-2011, 03:23 PM
MarkDuplicate, coverage

Hi,

I am using MarkDuplicate.jar of Picard tools to remove duplicate reads. Then I convert bam file to pileup file to extract coverage...

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